Keep interesting parts only, or export your data as text or FASTA files Ability to edit and correct the sequence.Direct access to both sequence and translation.Reading and writing of most common trace file formats.Analyzing your sequence was never so much fun! At last there is a decent solution for analyzing trace files on the MacOSX platform, taking another step away from slow and non-native programs from the MacOS9 period.Īlso, 4Peaks supports most commonly used sequence file formats right out of the box, you no longer have to convert them first using AppleScripts or other painstaking methods. According to Mek & Tosj:įinally a decent DNA sequence viewer for Mac OSX!ĤPeaks is a program that help molecular biologists to visualize and edit their DNA sequence files. The app features direct sequence/translation access and search abilities. 4Peaks is a utility designed for DNA sequence file visualization and management.

Please note that this site is currently under construction - please check back in a few days for more information.Mek & Tosj have released a new app for Mac users, 4Peaks 1.0. The Center for Bioinformatics and Computational Biology at the University of Maryland has compiled a collection of sequence data from several bacterial genomes for benchmarking sequence assembly software. A collaboration of four research institutes. Free for research and educational use.Īn open source software package for aligning whole genomes.Ī Modular, Open Source whole genome assembler. Free for research and educational use.Ī sequence assembly program for whole genome assemblies from short ('next generation') sequencing reads from MIT's Broad Institute. Assembles Sanger sequencing data and Roche 454 data.Ī whole genome assembler for Sanger sequencing reads developed at the Broad Institute. The program that was used to assemble the first human genome, released as open source in 2004. Phrap pioneered a number of important idea, including the automatic use of entire sequences without trimming and accurate consensus sequences based on sequence qualities and confirmation by other reads. The sequence assembly program Phrap was developed to assemble shotgun cosmid and BAC sequencing projects in the Human Genome Project. Part of the Staden package of DNA sequence analysis tools. Open source sequence assembler for Sanger sequencing. Free and Open Source Sequence Assembly Programs Gap4 / Gap5 An overview of different problems and approaches is available on Wikipedia. Sequence assembly refers to the process of merging DNA fragments into larger 'contigs' for subsequent analysis. This site is dedicated to software for DNA sequence assembly and alignment.

Dna sequence viewer for mac